Fine-scale substrate use by a small sit-and-wait predator

Substrate choice is one of the most important decisions thatsit-and-wait predators must make. Not only may it dictate theprey available but also the cover for the predator which mayconceal it from prey or its own predators. However, while ona particular substrate the behavior and use of that substratemay vary widely. When naïve, newly emerged crab spiderlingsMisumena vatia (Thomisidae) occupied flowering goldenrod Solidagocanadensis, their behavior differed markedly on inflorescenceswith relatively sparse and densely packed flower heads as wellas on experimentally thinned and unthinned inflorescences. Initially,the spiderlings most often hunted at the thinned sites and hidamong the dense flower heads at the unthinned sites, a differencethat disappeared in all broods tested after 2–3 h, possiblybecause of the growing hunger of the initially concealed individuals.Prey capture (dance flies) in the thinned sites initially significantlyexceeded that in unthinned sites but subsequently did not differ.However, spiderlings encountered their principal predator, thejumping spider Pelegrina insignis, significantly more oftenon unthinned than thinned inflorescences. Even though usagepatterns initially differed strikingly, spiderlings did notdiffer in their rates of quitting the two types of sites. Theseresults suggest a trade-off between foraging and predator avoidancethat changes in response to increasing hunger over time.     

The adaptive bases of ant-mimicry in a neotropical aphantochilid spider (Araneae: Aphantochilidae)

The aphantochilid spider Aphanlochilus rogersi accurately mimics black ants of tribe Cephalotini, and is commonly found in the neighbourhood of its models' nests. The mimic seems to be a specialized predator of this type of ant, rejecting any insect offered as prey other than cephalotines. In the field, A. rogersi was observed preying on the model species Zacryptocerus pusillus. In captivity, the spider preyed on the models Z. pusillus and Z. depressus, as well as on the yellow non-model Z. clypeatus. Recognition of correct prey by A. rogersi appears to be based primarily on visual and tactile stimuli. Capturing ant prey from behind was the most common attack tactic observed in A. rogersi, and is probably safer than frontal attacks, as in this case the spider can be bitten on the legs before the ant is immobilized. Aphanlochilus rogersi, when feeding on the hard-bodied ant models, uses the ant corpses as a ‘protective shield’ against patrolling ants of the victim's colony and resembles an ant carrying a dead companion. Certain types of mimetic traits in A. rogersi (close similarity to ant models in integument texture and pilosity of body and legs), together with ‘shielding behaviour’, are thought to function as ant-deceivers, facilitating the obligatory intimate contact the mimic must make with cephalotines in order to capture a prey among other ants. The close similarity in the arrangement of dorsal spines, body shape, integument brightness and locomotion, together with antennal illusion, is regarded as a strategy of A. rogersi for deceiving visually-hunting predators that avoid its sharp spined ant models. It is proposed that ant-mimicry in A. rogersi has both an aggressive and a Batesian adaptive component, and evolved as a result of combined selective pressures exerted both by Cephalotini ant models (through defensive behaviour towards the mimics which attack them) and predators that avoid cephalotines (through predatory behaviour toward imperfect mimics). This suggestion is schematized and discussed in terms of two tripartite mimicry systems.     

Comparative genomic analysis of Ralstonia solanacearum reveals candidate genes for host specificity

Background

Ralstonia solanacearum is a vascular soil-borne plant pathogen with an unusually broad host range. This economically destructive and globally distributed bacterium has thousands of distinct lineages within a heterogeneous and taxonomically disputed species complex. Some lineages include highly host-adapted strains (ecotypes), such as the banana Moko disease-causing strains, the cold-tolerant potato brown rot strains (also known as R3bv2) and the recently emerged Not Pathogenic to Banana (NPB) strains.

Results

These distinct ecotypes offer a robust model to study host adaptation and the emergence of ecotypes because the polyphyletic Moko strains include lineages that are phylogenetically close to the monophyletic brown rot and NPB strains. Draft genomes of eight new strains belonging to these three model ecotypes were produced to complement the eleven publicly available R. solanacearum genomes. Using a suite of bioinformatics methods, we searched for genetic and evolutionary features that distinguish ecotypes and propose specific hypotheses concerning mechanisms of host adaptation in the R. solanacearum species complex. Genome-wide, few differences were identified, but gene loss events, non-synonymous polymorphisms, and horizontal gene transfer were identified among type III effectors and were associated with host range differences.

Conclusions

This extensive comparative genomics analysis uncovered relatively few divergent features among closely related strains with contrasting biological characteristics; however, several virulence factors were associated with the emergence of Moko, NPB and brown rot and could explain host adaptation.

Electronic supplementary material

The online version of this article (doi:10.1186/s12864-015-1474-8) contains supplementary material, which is available to authorized users.     

Using genome-wide associations to identify metabolic pathways involved in maize aflatoxin accumulation resistance

Background

Aflatoxin is a potent carcinogen that can contaminate grain infected with the fungus Aspergillus flavus. However, resistance to aflatoxin accumulation in maize is a complex trait with low heritability. Here, two complementary analyses were performed to better understand the mechanisms involved. The first coupled results of a genome-wide association study (GWAS) that accounted for linkage disequilibrium among single nucleotide polymorphisms (SNPs) with gene-set enrichment for a pathway-based approach. The rationale was that the cumulative effects of genes in a pathway would give insight into genetic differences that distinguish resistant from susceptible lines of maize. The second involved finding non-pathway genes close to the most significant SNP-trait associations with the greatest effect on reducing aflatoxin in multiple environments. Unlike conventional GWAS, the latter analysis emphasized multiple aspects of SNP-trait associations rather than just significance and was performed because of the high genotype x environment variability exhibited by this trait.

Results

The most significant metabolic pathway identified was jasmonic acid (JA) biosynthesis. Specifically, there was at least one allelic variant for each step in the JA biosynthesis pathway that conferred an incremental decrease to the level of aflatoxin observed among the inbred lines in the GWAS panel. Several non-pathway genes were also consistently associated with lowered aflatoxin levels. Those with predicted functions related to defense were: leucine-rich repeat protein kinase, expansin B3, reversion-to-ethylene sensitivity1, adaptor protein complex2, and a multidrug and toxic compound extrusion protein.

Conclusions

Our genetic analysis provided strong evidence for several genes that were associated with aflatoxin resistance. Inbred lines that exhibited lower levels of aflatoxin accumulation tended to share similar haplotypes for genes specifically in the pathway of JA biosynthesis, along with several non-pathway genes with putative defense-related functions. Knowledge gained from these two complementary analyses has improved our understanding of population differences in aflatoxin resistance.

Electronic supplementary material

The online version of this article (doi:10.1186/s12864-015-1874-9) contains supplementary material, which is available to authorized users.     

Additions to the checklist of Scoliidae,Sphecidae, Pompilidae and Vespidae of Peru,with notes on the endemic status of some species (Hymenoptera,Aculeata)

The first checklist of the Peruvian Hymenoptera listed 1169 species and subspecies of aculeate wasps, including 173 species of Pompilidae, seven of Scoliidae, 39 of Sphecidae and 403 of Vespidae. Herein are reported 32 species as new for Peru based mainly on the collection of the Natural History Museum, London. The loss of the endemic status of two species is also reported: Entypus peruvianus (Rohwer) (Pompilidae: Pepsinae) and Omicron ruficolle schunkei Giordani Soika (Vespidae: Eumeninae).     

Different positions of males approaching towards females and male choices between webs with and without stabilimentum in a sexually cannibalistic orb‐web spider,Argiope bruennichi

Males of the orb‐weaving spider species Argiope bruennichi (Araneidae) are frequently victims of sexual cannibalism. Therefore, a male spider approaching a female should have strategies to avoid being killed before copulation. Our present field study detected six types of A. bruennichi male positions vis‐à‐vis the female web. In 78% of situations (39/50), only one male attached to a female. Two males attached to the same female in 11 cases. We observed no cases of three or more males on the same female web. We most commonly observed the situation of a male staying in its own web and connecting to a female's web with its silk thread (46% of cases). Of the female webs chosen by males, 68% were decorated with both an upper and lower portion of stabilimentum – a conspicuous white silk structure that reflects much more ultraviolet light than other spider silks in the web. Only 14% (7/50) of the selected webs lacked stabilimentum. Therefore, we conducted an experiment to investigate the males' choice between females' webs with and without stabilimentum. Of the 24 males used in the experiment, 10 chose webs with stabilimentum. This result did not show a strong preference of the male for stabilimentum between equally sized webs, and thus did not support an earlier suggestion that stabilimentum in A. bruennichi might function to guide males to females for mating.     

Climate change effects on walnut pests in California

Increasing temperatures are likely to impact ectothermic pests of fruits and nuts. This paper aims to assess changes to pest pressure in California's US$0.7 billion walnut industry due to recent historic and projected future temperature changes. For two past (1950 and 2000) and 18 future climate scenarios (2041–2060 and 2080–2099; each for three General Circulation Models and three greenhouse gas emissions scenarios), 100 years of hourly temperature were generated for 205 locations. Degree‐day models were used to project mean generation numbers for codling moth (Cydia pomonella L.), navel orangeworm (Amyelois transitella Walker), two‐spotted spider mite (Tetranychus urticae Koch), and European red mite (Panonychus ulmi Koch). In the Central Valley, the number of codling moth generations predicted for degree days accumulated between April 1 and October 1 rose from 2–4 in 1950 to 3–5 among all future scenarios. Generation numbers increased from 10–18 to 14–24 for two‐spotted spider mite, from 9–14 to 14–20 for European red mite, and from 2–4 to up to 5 for navel orangeworm. Overall pest pressure can thus be expected to increase substantially. Our study did not include the possibility of higher winter survival rates, leading to higher initial pest counts in spring, or of extended pest development times in the summer, factors that are likely to exacerbate future pest pressure. On the other hand, initiation of diapause may prevent an extension of the season length for arthropods, and higher incidence of heat death in summer may constrain pest population sizes. More information on the impact of climate change on complex agroecological food webs and on the response of pests to high temperatures is needed for improving the reliability of projections.